ZFIN is now using GRCz12tu for Genomic Data
Gene

rpap1

ID
ZDB-GENE-090914-1
Name
RNA polymerase II associated protein 1
Symbol
rpap1 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Orthologous to human RPAP1 (RNA polymerase II associated protein 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rpap1 Human Ortholog
No data available
Associated With rpap1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR057989 RPAP1/MINIYO-like, TPR repeats
Family IPR039913 RNA polymerase II-associated protein RPAP1/Rba50
Domain Details Per Protein
Protein Additional Resources Length RNA polymerase II-associated protein RPAP1/Rba50 RPAP1/MINIYO-like, TPR repeats
UniProtKB:E7FGQ5 InterPro 1406
UniProtKB:A0A8M1RMN0 InterPro 1403
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rpap1-201 (1) Ensembl 4,387 nt
mRNA rpap1-202 (1) Ensembl 4,546 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations