Gene

plxnb1b

ID
ZDB-GENE-090812-4
Name
plexin b1b
Symbol
plxnb1b Nomenclature History
Previous Names
  • fb93g07
  • si:dkey-19e4.7
  • wu:fb93g07 (1)
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to enable semaphorin receptor activity. Acts upstream of or within axon extension. Predicted to be located in membrane. Predicted to be part of semaphorin receptor complex. Predicted to be active in plasma membrane. Orthologous to human PLXNB1 (plexin B1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
1 Figure from Hilario et al., 2009
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la015862TgTransgenic insertionUnknownUnknownDNA
sa9253Allele with one point mutationUnknownPremature StopENU
sa12455Allele with one point mutationUnknownPremature StopENU
sa16675Allele with one point mutationUnknownSplice SiteENU
sa17905Allele with one point mutationUnknownPremature StopENU
sa20696Allele with one point mutationUnknownPremature StopENU
sa20697Allele with one point mutationUnknownPremature StopENU
sa31510Allele with one point mutationUnknownPremature StopENU
sa33866Allele with one point mutationUnknownPremature StopENU
sa33867Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
Targeting Reagent Created Alleles Citations
MO1-plxnb1bN/AHilario et al., 2009
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Human Disease
Associated With plxnb1b Human Ortholog
No data available
Associated With plxnb1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001627 Sema domain
Domain IPR002909 IPT domain
Domain IPR013548 Plexin, cytoplasmic RasGAP domain
Domain IPR016201 PSI domain
Domain IPR041019 Plexin, TIG domain 1
1 - 5 of 14 Show all
Domain Details Per Protein
Protein Length Immunoglobulin E-set Immunoglobulin-like fold IPT domain Plexin, cytoplasmic RasGAP domain Plexin, cytoplasmic RhoGTPase-binding domain Plexin family Plexin repeat Plexin, TIG domain 1 Plexin, TIG domain 2 PSI domain Rho GTPase activation protein Sema domain Sema domain superfamily WD40/YVTN repeat-like-containing domain superfamily
UniProtKB:F1Q7U0 2220
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 6
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA plxnb1b-201 (1) Ensembl 10,571 nt
mRNA plxnb1b-202 (1) Ensembl 10,614 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-19E4ZFIN Curated Data
EncodesESTfb93g07ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanPLXNB13
Amino acid sequence comparison (2)
MousePlxnb19
Amino acid sequence comparison (1)
Citations
1 - 7 of 7
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