ZFIN is now using GRCz12tu for Genomic Data
Gene
rph3aa
- ID
- ZDB-GENE-090706-2
- Name
- rabphilin 3A homolog (mouse), a
- Symbol
- rph3aa Nomenclature History
- Previous Names
-
- fc61h10
- wu:fc61h10
- zmp:0000000709 (1)
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in calcium-dependent activation of synaptic vesicle fusion and positive regulation of calcium ion-dependent exocytosis. Predicted to be active in neuron projection and postsynaptic membrane. Predicted to be extrinsic component of synaptic vesicle membrane. Orthologous to human RPH3A (rabphilin 3A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000008 | C2 domain |
| Domain | IPR001565 | Synaptotagmin |
| Domain | IPR010911 | Rab-binding domain |
| Domain | IPR017455 | Zinc finger, FYVE-related |
| Domain | IPR041282 | FYVE-type zinc finger |
| Domain | IPR047022 | Rabphilin/Doc2, first C2 domain |
| Family | IPR043566 | Rabphilin/Doc2/Noc2 |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR035892 | C2 domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | C2 domain | C2 domain superfamily | FYVE-type zinc finger | Rab-binding domain | Rabphilin/Doc2, first C2 domain | Rabphilin/Doc2/Noc2 | Synaptotagmin | Zinc finger, FYVE/PHD-type | Zinc finger, FYVE-related | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7FEI1 | InterPro | 597 | ||||||||||
| UniProtKB:A0A8M2BJU8 | InterPro | 597 | ||||||||||
| UniProtKB:A0A8M2BJS5 | InterPro | 598 | ||||||||||
| UniProtKB:A0AB32U106 | InterPro | 581 | ||||||||||
| UniProtKB:A0AC58GL39 | InterPro | 597 | ||||||||||
| UniProtKB:A0AC58GL58 | InterPro | 629 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rph3aa-201
(1)
|
Ensembl | 351 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance