Gene
ccbe1
- ID
- ZDB-GENE-090506-7
- Name
- collagen and calcium binding EGF domains 1
- Symbol
- ccbe1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Description
- Involved in lymphangiogenesis; sprouting angiogenesis; and venous blood vessel morphogenesis. Acts upstream of or within blood vessel morphogenesis; vascular endothelial growth factor signaling pathway; and venous endothelial cell migration involved in lymph vessel development. Predicted to be located in extracellular region. Is expressed in several structures, including axial vasculature; epiphysis; head; intermediate mesoderm; and myoseptum. Human ortholog(s) of this gene implicated in Hennekam syndrome. Orthologous to human CCBE1 (collagen and calcium binding EGF domains 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 6 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 13 figures from 8 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
Hennekam syndrome | Alliance | Hennekam lymphangiectasia-lymphedema syndrome 1 | 235510 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Conserved_site | IPR018097 | EGF-like calcium-binding, conserved site |
Domain | IPR000742 | EGF-like domain |
Domain | IPR001881 | EGF-like calcium-binding domain |
Family | IPR050751 | Extracellular matrix structural protein |
PTM | IPR000152 | EGF-type aspartate/asparagine hydroxylation site |
Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
Protein | Additional Resources | Length | Collagen triple helix repeat | EGF-like calcium-binding, conserved site | EGF-like calcium-binding domain | EGF-like domain | EGF-type aspartate/asparagine hydroxylation site | Extracellular matrix structural protein |
---|---|---|---|---|---|---|---|---|
UniProtKB:A8WGB1 | InterPro | 401 | ||||||
UniProtKB:A0A8M9P3B9 | InterPro | 359 | ||||||
UniProtKB:A0A8M6YWX1 | InterPro | 328 |
Interactions and Pathways
No data available
Plasmids
No data available