ZFIN is now using GRCz12tu for Genomic Data
Gene
matr3l1.2
- ID
- ZDB-GENE-090505-1
- Name
- matrin 3-like 1.2
- Symbol
- matr3l1.2 Nomenclature History
- Previous Names
-
- si:bz1d10.1
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Is expressed in brain; gut; and retina.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7149870 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR000690 | Matrin/U1-C, C2H2-type zinc finger |
| Domain | IPR003604 | Matrin/U1-C-like, C2H2-type zinc finger |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Matrin/U1-C, C2H2-type zinc finger | Matrin/U1-C-like, C2H2-type zinc finger | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0AC58H6D3 | InterPro | 863 | |||||
| UniProtKB:A0AC58H6D5 | InterPro | 879 | |||||
| UniProtKB:A0AC58H6E7 | InterPro | 1155 | |||||
| UniProtKB:A0AC58H6E8 | InterPro | 1139 | |||||
| UniProtKB:Q800H6 | InterPro | 1155 | |||||
| UniProtKB:A0AB32T5I2 | InterPro | 1139 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
matr3l1.1-201
(1)
|
Ensembl | 1,261 nt | ||
| mRNA |
matr3l1.1-202
(1)
|
Ensembl | 3,991 nt | ||
| mRNA |
matr3l1.2-203
(1)
|
Ensembl | 3,468 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers