ZFIN is now using GRCz12tu for Genomic Data
Gene
sdccag8
- ID
- ZDB-GENE-090313-318
- Name
- SHH signaling and ciliogenesis regulator sdccag8
- Symbol
- sdccag8 Nomenclature History
- Previous Names
-
- si:dkey-60b15.1
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within chordate embryonic development. Predicted to be located in anchoring junction. Predicted to be active in centriole and centrosome. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 16 and Senior-Loken syndrome. Orthologous to human SDCCAG8 (SHH signaling and ciliogenesis regulator SDCCAG8).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Bardet-Biedl syndrome 16 | Alliance | Bardet-Biedl syndrome 16 | 615993 |
| Senior-Loken syndrome | Alliance | Senior-Loken syndrome 7 | 613615 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR031887 | Serologically defined colon cancer antigen 8 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Serologically defined colon cancer antigen 8 |
|---|---|---|---|
| UniProtKB:B8JK76 | InterPro | 701 | |
| UniProtKB:A0A2R8QM06 | InterPro | 702 | |
| UniProtKB:A0A8M9PXV8 | InterPro | 701 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sdccag8-201
(1)
|
Ensembl | 2,672 nt | ||
| mRNA |
sdccag8-202
(1)
|
Ensembl | 408 nt | ||
| mRNA |
sdccag8-203
(1)
|
Ensembl | 667 nt | ||
| mRNA |
sdccag8-204
(1)
|
Ensembl | 934 nt | ||
| mRNA |
sdccag8-205
(1)
|
Ensembl | 783 nt | ||
| mRNA |
sdccag8-206
(1)
|
Ensembl | 2,512 nt |
Interactions and Pathways
No data available
Plasmids
- Genome Browsers