ZFIN is now using GRCz12tu for Genomic Data
Gene
sdccag8
- ID
- ZDB-GENE-090313-318
- Name
- SHH signaling and ciliogenesis regulator sdccag8
- Symbol
- sdccag8 Nomenclature History
- Previous Names
-
- si:dkey-60b15.1
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Acts upstream of or within chordate embryonic development. Predicted to be located in several cellular components, including anchoring junction; cell projection; and cytoskeleton. Predicted to be active in centriole and centrosome. Human ortholog(s) of this gene implicated in Bardet-Biedl syndrome 16 and Senior-Loken syndrome. Orthologous to human SDCCAG8 (SHH signaling and ciliogenesis regulator SDCCAG8).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Bardet-Biedl syndrome 16 | Alliance | Bardet-Biedl syndrome 16 | 615993 |
| Senior-Loken syndrome | Alliance | Senior-Loken syndrome 7 | 613615 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR031887 | Serologically defined colon cancer antigen 8 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Serologically defined colon cancer antigen 8 |
|---|---|---|---|
| UniProtKB:B8JK76 | InterPro | 701 | |
| UniProtKB:A0A2R8QM06 | InterPro | 702 | |
| UniProtKB:A0A8M9PXV8 | InterPro | 701 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sdccag8-201
(1)
|
Ensembl | 2,672 nt | ||
| mRNA |
sdccag8-202
(1)
|
Ensembl | 408 nt | ||
| mRNA |
sdccag8-203
(1)
|
Ensembl | 667 nt | ||
| mRNA |
sdccag8-204
(1)
|
Ensembl | 934 nt | ||
| mRNA |
sdccag8-205
(1)
|
Ensembl | 783 nt | ||
| mRNA |
sdccag8-206
(1)
|
Ensembl | 2,512 nt |
Interactions and Pathways
No data available
Plasmids
- Genome Browsers