ZFIN ID: ZDB-GENE-090312-196
Gene Name: collagen, type XIX, alpha 1
Gene Symbol: col19a1    Nomenclature History

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Previous Names: si:dkey-49l3.2, stumpy (1), sty, zgc:153049

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Predicted to have extracellular matrix structural constituent. Involved in axon extension involved in axon guidance. Predicted to localize to extracellular matrix and extracellular space. Is expressed in dermis and myotome. Orthologous to human COL19A1 (collagen type XIX alpha 1 chain).
Genome Resources: Alliance (1),  Gene:571468 (1), 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
b393 Complex Unknown Unknown ENU
b398 Unknown Unknown Unknown
col19a1_unspecified Unspecified Unknown Unknown
p37er Unknown Unknown Unknown ENU
sa22363 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42271 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42272 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42273 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-col19a1 N/A 1
    MO2-col19a1 N/A 2
    DISEASE ASSOCIATED WITH col19a1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH col19a1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process axon extension involved in axon guidance (more)
    Cellular Component extracellular matrix (more)
    Molecular Function extracellular matrix structural constituent (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA col19a1-201 (1)    Ensembl 6802
    col19a1-202 (1)    Ensembl 1193
    Browsers: NCBI
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM col19a1 No data available
    MARKER RELATIONSHIPS
    col19a1 Contained in: [BAC] CH73-52H17 (1), CH211-37A16 (1), CH211-153A20 (1), DKEY-49L3 (1) (order this), DKEY-180F8 (1) (order this)
    col19a1 Encodes: [cDNA] MGC:191832 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001077317 (1) 1211 nt
    Genomic GenBank:BX322620 (1) 192504 nt
    Select Tool
    Polypeptide UniProtKB:B8A4T5 (1) 617 aa
    Sequence Information (all 29)
    ORTHOLOGY for col19a1 ( Chr: 13 )
    CITATIONS (26)