camta1a

ID

ZDB-GENE-090312-183

Name

calmodulin binding transcription activator 1a

Symbol

camta1a Nomenclature History

Previous Names

si:dkey-223i19.5

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable double-stranded DNA binding activity and transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in telencephalon. Human ortholog(s) of this gene implicated in nonprogressive cerebellar ataxia with mental retardation. Orthologous to human CAMTA1 (calmodulin binding transcription activator 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Diotel et al., 2015

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With camta1a Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
nonprogressive cerebellar ataxia with mental retardation	Alliance	Cerebellar dysfunction with variable cognitive and behavioral abnormalities	614756

Associated With camta1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Binding_site	IPR000048	IQ motif, EF-hand binding site
Domain	IPR002909	IPT domain
Domain	IPR005559	CG-1 DNA-binding domain
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR014756	Immunoglobulin E-set
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0A8M9PFK5	InterPro	1817
UniProtKB:A0A8M9Q822	InterPro	1578
UniProtKB:A0A8M9PWY3	InterPro	1771
UniProtKB:A0A8M9PQV2	InterPro	726
UniProtKB:A0A8M9Q3X1	InterPro	1550
UniProtKB:A0A8M3ANU5	InterPro	1799
UniProtKB:A0A8M9P5K3	InterPro	1818
UniProtKB:A0A8M6Z3X4	InterPro	1800
UniProtKB:A0A8M9PL98	InterPro	1784
UniProtKB:A0A8M2B977	InterPro	1800
UniProtKB:A0A8M9P5K7	InterPro	726
UniProtKB:A0A8M9PE49	InterPro	1446
UniProtKB:A0A8M9PTM2	InterPro	1667
UniProtKB:A0A8M9PX14	InterPro	1596
UniProtKB:A0AB32TH30	InterPro	1597
UniProtKB:A0AB32TH33	InterPro	1579
UniProtKB:A0AB32TK34	InterPro	1579
UniProtKB:A0AC58ILX2	InterPro	1792
UniProtKB:A0AC58ILX4	InterPro	1811
UniProtKB:A0AC58ILX5	InterPro	1764
UniProtKB:A0AC58ILX6	InterPro	1746
UniProtKB:A0AC58ILX7	InterPro	1793
UniProtKB:A0AC58ILX8	InterPro	1793
UniProtKB:A0AC58ILY0	InterPro	1759
UniProtKB:A0AC58ILY1	InterPro	1799
UniProtKB:A0AC58ILY3	InterPro	1688
UniProtKB:A0AC58ILY5	InterPro	1687
UniProtKB:A0AC58ILY6	InterPro	1641
UniProtKB:A0AC58ILY7	InterPro	1688
UniProtKB:A0AC58ILY8	InterPro	1640
UniProtKB:A0AC58ILY9	InterPro	1745
UniProtKB:A0AC58ILZ1	InterPro	1633
UniProtKB:A0AC58ILZ2	InterPro	1641
UniProtKB:A0AC58ILZ4	InterPro	1640
UniProtKB:A0AC58ILZ5	InterPro	1641
UniProtKB:A0AC58ILZ7	InterPro	1666
UniProtKB:A0AC58ILZ9	InterPro	1713
UniProtKB:A0AC58IM01	InterPro	1573
UniProtKB:A0AC58IM02	InterPro	1527
UniProtKB:A0AC58IM03	InterPro	1573
UniProtKB:A0AC58IM05	InterPro	1527
UniProtKB:A0AC58IM06	InterPro	701
UniProtKB:A0AC58IM10	InterPro	1527
UniProtKB:A0AC58IM11	InterPro	1527
UniProtKB:A0AC58IM12	InterPro	1620
UniProtKB:A0AC58IM13	InterPro	1688
UniProtKB:A0AC58IM14	InterPro	1586
UniProtKB:A0AC58IM21	InterPro	1574
UniProtKB:A0AC58IM26	InterPro	1688
UniProtKB:A0AC58IM33	InterPro	1737
UniProtKB:A0AC58IM39	InterPro	1574
UniProtKB:A0AC58IM57	InterPro	1599