ZFIN is now using GRCz12tu for Genomic Data

Gene

si:ch211-132g1.3

ID

ZDB-GENE-090312-148

Name

si:ch211-132g1.3

Symbol

si:ch211-132g1.3 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to be located in membrane.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

Alliance

High Throughput Data

GEO (1)

Expression Atlas

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:ch211-132g1.3 Human Ortholog

No data available

Associated With si:ch211-132g1.3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR007110	Immunoglobulin-like domain
Family	IPR015631	CD2/SLAM family receptor
Homologous_superfamily	IPR013783	Immunoglobulin-like fold

Domain Details Per Protein

Protein	Additional Resources	Length	CD2/SLAM family receptor	Immunoglobulin-like domain	Immunoglobulin-like fold
UniProtKB:A0A8M9Q7X9	InterPro	375
UniProtKB:A0A8M9PJG7	InterPro	363
UniProtKB:A0A8M9QDC9	InterPro	340
UniProtKB:A0A8M9Q7Y3	InterPro	272
UniProtKB:A0A8M9QDC4	InterPro	386
UniProtKB:A0A8M9Q2N6	InterPro	340
UniProtKB:A0A8M9PWW2	InterPro	363

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	si:ch211-132g1.3-201 (1) Ensembl	Ensembl		816 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-132g1.3-202 (1) Ensembl	Ensembl		1,242 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-132g1.3-210 (1) Ensembl	Ensembl		1,514 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-132g1.3-002 (1) Ensembl	Ensembl		693 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-132g1.3-003 (1) Ensembl	Ensembl		152 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-132g1.3-004 (1) Ensembl	Ensembl		318 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-132g1.3-005 (1) Ensembl	Ensembl		861 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-132g1.3-006 (1) Ensembl	Ensembl		819 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-132g1.3-007 (1) Ensembl	Ensembl		433 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-132g1.3-008 (1) Ensembl	Ensembl		665 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

Orthology

Comparative Orthology: Alliance

Citations