Gene
med16
- ID
- ZDB-GENE-090306-4
- Name
- mediator complex subunit 16
- Symbol
- med16 Nomenclature History
- Previous Names
-
- fc22c09
- fc29h12
- lppr3b
- wu:fc22c09
- wu:fc29h12
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Description
- Predicted to be involved in positive regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED16 (mediator complex subunit 16).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7136982 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR021665 | Mediator complex, subunit Med16, N-terminal |
| Domain | IPR048339 | Mediator complex subunit 16, C-terminal |
| Domain | IPR048616 | Mediator of RNA polymerase II transcription subunit 16 , central helical bridge |
| Family | IPR048338 | Mediator complex, subunit Med16 |
| Homologous_superfamily | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
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Domain Details Per Protein
| Protein | Additional Resources | Length | Mediator complex subunit 16, C-terminal | Mediator complex, subunit Med16 | Mediator complex, subunit Med16, N-terminal | Mediator of RNA polymerase II transcription subunit 16 , central helical bridge | WD40 repeat | WD40-repeat-containing domain superfamily | WD40/YVTN repeat-like-containing domain superfamily |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A2R8Q3Q1 | InterPro | 833 | |||||||
| UniProtKB:E7F602 | InterPro | 847 |
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- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Varshney, G.K., Lu, J., Gildea, D., Huang, H., Pei, W., Yang, Z., Huang, S.C., Schoenfeld, D.S., Pho, N., Casero, D., Hirase, T., Mosbrook-Davis, D.M., Zhang, S., Jao, L.E., Zhang, B., Woods, I.G., Zimmerman, S., Schier, A.F., Wolfsberg, T., Pellegrini, M., Burgess, S.M., and Lin, S. (2013) A large-scale zebrafish gene knockout resource for the genome-wide study of gene function. Genome research. 23(4):727-735
- Wang, D., Jao, L.E., Zheng, N., Dolan, K., Ivey, J., Zonies, S., Wu, X., Wu, K., Yang, H., Meng, Q., Zhu, Z., Zhang, B., Lin, S., and Burgess, S.M. (2007) Efficient genome-wide mutagenesis of zebrafish genes by retroviral insertions. Proceedings of the National Academy of Sciences of the United States of America. 104(30):12428-12433
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