Gene

mmp17b

ID
ZDB-GENE-081107-17
Name
matrix metallopeptidase 17b
Symbol
mmp17b Nomenclature History
Previous Names
  • mmpl2
  • MMPLd (1)
  • sb:eu434 (1)
  • si:ch211-199b20.1
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have metalloendopeptidase activity. Involved in neural crest cell migration. Predicted to localize to extracellular space. Is expressed in artery; neural tube; spinal cord; trunk; and vein. Orthologous to human MMP17 (matrix metallopeptidase 17).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Leigh et al., 2013
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With mmp17b Human Ortholog
No data available
Associated With mmp17b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000585 Hemopexin-like domain
Domain IPR001818 Peptidase M10, metallopeptidase
Domain IPR002477 Peptidoglycan binding-like
Domain IPR006026 Peptidase, metallopeptidase
Domain IPR033739 Peptidase M10A, catalytic domain
Family IPR021190 Peptidase M10A
Homologous_superfamily IPR024079 Metallopeptidase, catalytic domain superfamily
Homologous_superfamily IPR036365 PGBD-like superfamily
Homologous_superfamily IPR036375 Hemopexin-like domain superfamily
Repeat IPR018487 Hemopexin-like repeats
Domain Details Per Protein
Protein Length Hemopexin-like domain Hemopexin-like domain superfamily Hemopexin-like repeats Metallopeptidase, catalytic domain superfamily Peptidase M10A Peptidase M10A, catalytic domain Peptidase M10, metallopeptidase Peptidase, metallopeptidase Peptidoglycan binding-like PGBD-like superfamily
UniProtKB:A0A0R4IB00 613
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA mmp17b-201 (1) Havana 6270 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations