Gene

asgrl1

ID

ZDB-GENE-081105-120

Name

asialoglycoprotein receptor-like 1

Symbol

asgrl1 Nomenclature History

Previous Names

dcsign-like b (1)
si:ch211-170d8.5 (1)

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to enable carbohydrate binding activity and pattern recognition receptor activity. Predicted to be involved in immune response. Predicted to be located in membrane. Predicted to be active in external side of plasma membrane. Is expressed in eye; head; and liver. Orthologous to several human genes including CD207 (CD207 molecule) and ASGR2 (asialoglycoprotein receptor 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

4 figures from 3 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With asgrl1 Human Ortholog

No data available

Associated With asgrl1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001304	C-type lectin-like
Domain	IPR033989	CD209-like, C-type lectin-like domain
Family	IPR050111	C-type lectin and snaclec domain-containing protein
Homologous_superfamily	IPR016186	C-type lectin-like/link domain superfamily
Homologous_superfamily	IPR016187	C-type lectin fold

Domain Details Per Protein

Protein	Length	CD209-like, C-type lectin-like domain	C-type lectin and snaclec domain-containing protein	C-type lectin fold	C-type lectin-like	C-type lectin-like/link domain superfamily
UniProtKB:A9C461 InterPro	270
UniProtKB:A9C460 InterPro	262

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-170d8.5-201 (1) Ensembl	Ensembl	1,345 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-170d8.5-202 (1) Ensembl	Ensembl	1,045 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-170d8.5-203 (1) Ensembl	Ensembl	508 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations