Gene
ranbp2
- ID
- ZDB-GENE-081104-93
- Name
- RAN binding protein 2
- Symbol
- ranbp2 Nomenclature History
- Previous Names
-
- nup358 (1)
- si:ch1073-55a19.2
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Description
- Predicted to contribute to GTPase activator activity. Predicted to be involved in NLS-bearing protein import into nucleus. Predicted to localize to cytoplasm and nuclear pore.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from Magre et al., 2019
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 4 figures from Magre et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| {Encephalopathy, acute, infection-induced, 3, susceptibility to} | 608033 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020892 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site |
| Domain | IPR000156 | Ran binding domain |
| Domain | IPR001876 | Zinc finger, RanBP2-type |
| Domain | IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain |
| Domain | IPR022011 | Nup358/RanBP2 E3 ligase domain |
| Family | IPR045255 | Ran binding protein RanBP1-like |
| Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Homologous_superfamily | IPR011993 | PH-like domain superfamily |
| Homologous_superfamily | IPR029000 | Cyclophilin-like domain superfamily |
| Homologous_superfamily | IPR036443 | Zinc finger, RanBP2-type superfamily |
| Repeat | IPR019734 | Tetratricopeptide repeat |
Domain Details Per Protein
| Protein | Length | Cyclophilin-like domain superfamily | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain | Nup358/RanBP2 E3 ligase domain | PH-like domain superfamily | Ran binding domain | Ran binding protein RanBP1-like | Tetratricopeptide-like helical domain superfamily | Tetratricopeptide repeat | Zinc finger, RanBP2-type | Zinc finger, RanBP2-type superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M9QJW3
|
2984 | |||||||||||
|
UniProtKB:A0A8M1RKE0
|
2958 | |||||||||||
|
UniProtKB:A0A8M9QFP1
|
2968 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ranbp2-201
(1)
|
Ensembl | 9,214 nt | ||
| mRNA |
ranbp2-202
(1)
|
Ensembl | 8,862 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-ranbp2 | polyclonal | Rabbit |
|
1 |
Plasmids
No data available