ZFIN ID: ZDB-GENE-081104-509
Gene Name: SH3-domain binding protein 4
Gene Symbol: sh3bp4
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-57b6.3

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(Including Attributions)
Location: Chr: 9 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have Ras GTPase binding activity; predicted to be involved in negative regulation of TOR signaling; predicted to localize to the cytoplasm; orthologous to human SH3BP4 (SH3 domain  ...
GENE EXPRESSION
All Expression Data: Fig. 3 from Gomez et al., 2012
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34634 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa41412 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH sh3bp4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH sh3bp4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process negative regulation of TOR signaling (more)
    Cellular Component cytoplasm (more)
    Molecular Function Ras GTPase binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000906 (1)
  • InterPro:IPR001452 (1)
  • InterPro:IPR035455 (1)
  • InterPro:IPR036028 (1)
  • PROSITE:PS50002 (1)
  • PROSITE:PS51145 (1)
  • Pfam:PF00791 (1)
  • Pfam:PF07653 (1)
  • Pfam:PF14604 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA sh3bp4-002 (1) 795
    mRNA sh3bp4-201 (1) 2883
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sh3bp4 No data available
    MARKER RELATIONSHIPS
    sh3bp4Contained in: [BAC] DKEY-57B6 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001123295 (1) 2883bp
    Genomic GenBank:CR392363 (1) 236488bp Blast at MegaBLAST
    Polypeptide UniProtKB:B0UYA0 (1) 960aa
    Sequence Clusters UniGene:91634 (1)
    Sequence Information (all 15)
    OTHER sh3bp4 GENE PAGES
  • Alliance (1)
  • Gene:569399 (1)
  • VEGA:OTTDARG00000026450 (1)
  • ORTHOLOGY for sh3bp4 (Chr: 9)
    CITATIONS (11)