col15a1a

ID

ZDB-GENE-080918-1

Name

collagen, type XV, alpha 1a

Symbol

col15a1a Nomenclature History

Previous Names

cb605 (1)
col15a1
col15a1l
sb:cb605

Type

protein_coding_gene

Location

Chr: 24 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Acts upstream of or within notochord cell differentiation and skeletal muscle tissue development. Predicted to be part of collagen trimer. Is expressed in several structures, including axial mesoderm; central nervous system; chordo neural hinge; integument; and pectoral fin. Orthologous to human COL15A1 (collagen type XV alpha 1 chain).

Genome Resources

Alliance (1)
Gene:792366 (1)

Note

None

Comparative Information

Expression

All Expression Data

8 figures from 2 publications

Cross-Species Comparison

Alliance

High Throughput Data

GEO (1)

Expression Atlas

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb605 (26 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 6 figures from Pagnon-Minot et al., 2008
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With col15a1a Human Ortholog

No data available

Associated With col15a1a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

No data available

Domain Details Per Protein

Protein	Additional Resources	Length
UniProtKB:A0AB32TKF5	InterPro	1164
UniProtKB:A0AC58IT40	InterPro	1247
UniProtKB:A0AC58IT45	InterPro	1031
UniProtKB:A0AC58IT50	InterPro	1186
UniProtKB:A0AC58IT52	InterPro	1017
UniProtKB:A0AC58IT54	InterPro	1016
UniProtKB:A0AC58IT55	InterPro	1248
UniProtKB:A0AC58IT57	InterPro	1167
UniProtKB:A0AC58IT58	InterPro	1030
UniProtKB:A0AC58IT59	InterPro	1171
UniProtKB:A0AC58IT64	InterPro	1168
UniProtKB:A0AC58IT70	InterPro	1172
UniProtKB:A0AC58IT71	InterPro	1181
UniProtKB:A0AC58IT85	InterPro	1182
UniProtKB:A0AC58IT87	InterPro	1185