ZFIN is now using GRCz12tu for Genomic Data
Gene
ralgapa1
- ID
- ZDB-GENE-080806-1
- Name
- Ral GTPase activating protein catalytic subunit alpha 1
- Symbol
- ralgapa1 Nomenclature History
- Previous Names
-
- garnl1
- tulip1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable GTPase activator activity. Predicted to be involved in small GTPase-mediated signal transduction. Is expressed in head. Orthologous to human RALGAPA1 (Ral GTPase activating protein catalytic subunit alpha 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Shimojima et al., 2009
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Shimojima et al., 2009
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Neurodevelopmental disorder with hypotonia, neonatal respiratory insufficiency, and thermodysregulation | 618797 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000331 | Rap/Ran-GAP domain |
| Domain | IPR046859 | Ral GTPase-activating protein subunit alpha/beta, N-terminal domain |
| Family | IPR027107 | Tuberin/Ral GTPase-activating protein subunit alpha |
| Homologous_superfamily | IPR016024 | Armadillo-type fold |
| Homologous_superfamily | IPR035974 | Rap/Ran-GAP superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Armadillo-type fold | Ral GTPase-activating protein subunit alpha/beta, N-terminal domain | Rap/Ran-GAP domain | Rap/Ran-GAP superfamily | Tuberin/Ral GTPase-activating protein subunit alpha |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9P0D3 | InterPro | 2471 | |||||
| UniProtKB:A0A8M9PL41 | InterPro | 2499 | |||||
| UniProtKB:A0A8M9PL46 | InterPro | 2105 | |||||
| UniProtKB:A0A8M9PEK0 | InterPro | 2518 | |||||
| UniProtKB:A0A8M9PP64 | InterPro | 2124 | |||||
| UniProtKB:A0A8M9P0D7 | InterPro | 2066 | |||||
| UniProtKB:A0A8M9PEK4 | InterPro | 2171 | |||||
| UniProtKB:A0A8M9PP58 | InterPro | 2515 | |||||
| UniProtKB:A0A8M9P993 | InterPro | 2460 | |||||
| UniProtKB:A0A8M9P998 | InterPro | 2152 | |||||
| UniProtKB:A0AC58HQQ0 | InterPro | 2452 | |||||
| UniProtKB:A0AC58HQQ3 | InterPro | 2449 | |||||
| UniProtKB:A0AC58HQQ4 | InterPro | 2413 | |||||
| UniProtKB:A0AC58HQQ5 | InterPro | 2410 | |||||
| UniProtKB:A0AC58HQR1 | InterPro | 2102 | |||||
| UniProtKB:A0AC58HQR6 | InterPro | 2063 | |||||
| UniProtKB:A0AC58HQS7 | InterPro | 1966 | |||||
| UniProtKB:A0AC58HQT4 | InterPro | 2457 | |||||
| UniProtKB:A0AC58HQU2 | InterPro | 2110 | |||||
| UniProtKB:A0AC58HQU9 | InterPro | 2113 | |||||
| UniProtKB:A0AC58HQV3 | InterPro | 2518 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ralgapa1-201
(1)
|
Ensembl | 6,846 nt | ||
| mRNA |
ralgapa1-202
(1)
|
Ensembl | 6,344 nt | ||
| mRNA |
ralgapa1-203
(1)
|
Ensembl | 7,844 nt | ||
| mRNA |
ralgapa1-204
(1)
|
Ensembl | 593 nt | ||
| mRNA |
ralgapa1-206
(1)
|
Ensembl | 926 nt | ||
| mRNA |
ralgapa1-207
(1)
|
Ensembl | 6,459 nt | ||
| mRNA |
ralgapa1-208
(1)
|
Ensembl | 6,366 nt | ||
| ncRNA |
ralgapa1-004
(1)
|
Ensembl | 422 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers