Gene

s100w

ID
ZDB-GENE-080407-2
Name
S100 calcium binding protein W
Symbol
s100w Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity and calcium-dependent protein binding activity. Predicted to be active in extracellular space and perinuclear region of cytoplasm.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Zhang et al., 2019
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With s100w Human Ortholog
No data available
Associated With s100w Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Domain IPR002048 EF-hand domain
Domain IPR013787 S100/CaBP-9k-type, calcium binding, subdomain
Domain IPR034325 S-100
Homologous_superfamily IPR011992 EF-hand domain pair
1 - 5 of 5
Domain Details Per Protein
Protein Additional Resources Length EF-Hand 1, calcium-binding site EF-hand domain EF-hand domain pair S-100 S100/CaBP-9k-type, calcium binding, subdomain
UniProtKB:A0A0R4IVA0 InterPro 103
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 16
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA s100w-201 (1)
Ensembl
Ensembl 754 nt
ZFIN BLAST
mRNA s100w-202 (1)
Ensembl
Ensembl 1,449 nt
ZFIN BLAST
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-247K7ZFIN Curated Data
1 - 1 of 1
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001326451 (1)754 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CT030031 (1)109680 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A0R4IVA0 (1)103 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
TSV
1 - 2 of 2
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