Gene
si:ch211-79k12.1
- ID
- ZDB-GENE-080303-9
- Name
- si:ch211-79k12.1
- Symbol
- si:ch211-79k12.1 Nomenclature History
- Previous Names
-
- sc:d173 (1)
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to be involved in cell adhesion. Predicted to be located in membrane. Predicted to be active in plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2008
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cssl:d173 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| sa36122 | Allele with one point mutation | Unknown | Premature Stop | ENU |
1 - 1 of 1
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Family | IPR050831 | Carcinoembryonic antigen-related cell adhesion |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Carcinoembryonic antigen-related cell adhesion | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A4JYL2 | InterPro | 305 | ||||||
| UniProtKB:A0A8M1NCK2 | InterPro | 305 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-79k12.1-201
(1)
|
Ensembl | 1,840 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-79K12 | ZFIN Curated Data | |
| Encodes | cDNA | cssl:d173 | Bushell et al., 2007 |
1 - 2 of 2
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001083848 (1) | 1606 nt | ||
| Genomic | GenBank:CT867948 (2) | 87023 nt | ||
| Polypeptide | UniProtKB:A0A8M1NCK2 (1) | 305 aa |
No data available