Gene

srsf3b

ID
ZDB-GENE-071005-2
Name
serine and arginine rich splicing factor 3b
Symbol
srsf3b Nomenclature History
Previous Names
  • sfrs3b
  • wu:fb44e08
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to enable RNA binding activity. Orthologous to human SRSF3 (serine and arginine rich splicing factor 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
la028466TgTransgenic insertionUnknownUnknownDNA
sa13439Allele with one point mutationUnknownSplice SiteENU
sa24045Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With srsf3b Human Ortholog
No data available
Associated With srsf3b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Family IPR050907 Serine/Arginine-Rich Splicing Factor
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
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Domain Details Per Protein
Protein Length Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain Serine/Arginine-Rich Splicing Factor
UniProtKB:A0A8M9PV66 358
UniProtKB:A5WWG4 164
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 22
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA srsf3b-201 (1) Ensembl 1,067 nt
mRNA srsf3b-203 (1) Ensembl 811 nt
mRNA srsf3b-204 (1) Ensembl 793 nt
mRNA srsf3b-205 (1) Ensembl 985 nt
mRNA srsf3b-207 (1) Ensembl 1,229 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inFosmidCH1073-48M5ZFIN Curated Data
EncodesESTfb44e08
EncodescDNAMGC:63887ZFIN Curated Data
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanSRSF36
Conserved genome location (synteny) (3)
Phylogenetic tree (1)
Amino acid sequence comparison (3)
MouseSrsf317
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Phylogenetic tree (1)
Citations
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