Gene
alyref
- ID
- ZDB-GENE-070928-29
- Name
- Aly/REF export factor
- Symbol
- alyref Nomenclature History
- Previous Names
-
- tho4
- thoc4
- zgc:171753
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Description
- Predicted to enable mRNA binding activity. Predicted to be involved in mRNA export from nucleus. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be active in nucleus. Orthologous to human ALYREF (Aly/REF export factor).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR025715 | Chromatin target of PRMT1 protein, C-terminal |
| Family | IPR051229 | ALYREF mRNA export adapter |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
Domain Details Per Protein
| Protein | Length | ALYREF mRNA export adapter | Chromatin target of PRMT1 protein, C-terminal | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain |
|---|---|---|---|---|---|---|
|
UniProtKB:A7MBY2
|
280 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
alyref-201
(1)
|
Ensembl | 2,457 nt | ||
| mRNA |
alyref-202
(1)
|
Ensembl | 2,937 nt |
Interactions and Pathways
No data available
Plasmids
No data available