Gene

sf3b2

ID
ZDB-GENE-070928-1
Name
splicing factor 3b, subunit 2
Symbol
sf3b2 Nomenclature History
Previous Names
  • fb53c07
  • wu:fb53c07
  • wu:fb93b08
  • zgc:136773
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to U2 snRNP and spliceosomal complex. Is expressed in several structures, including mesenchyme; mesoderm; neural plate; neural rod; and tail bud. Orthologous to human SF3B2 (splicing factor 3b subunit 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
12 figures from Rauch et al., 2003
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sf3b2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Goldenhar syndrome Alliance Craniofacial microsomia 164210
Associated With sf3b2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003034 SAP domain
Domain IPR006568 PSP, proline-rich
Domain IPR007180 Domain of unknown function DUF382
Family IPR052584 Pre-mRNA Spliceosomal U2 snRNP Complex Component
Domain Details Per Protein
Protein Length Domain of unknown function DUF382 Pre-mRNA Spliceosomal U2 snRNP Complex Component PSP, proline-rich SAP domain
UniProtKB:A7YT51 825
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sf3b2-201 (1) Ensembl 2,478 nt
ncRNA sf3b2-001 (1) Ensembl 2,677 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations