ZFIN is now using GRCz12tu for Genomic Data
Gene

gbp3

ID
ZDB-GENE-070912-176
Name
guanylate binding protein 3
Symbol
gbp3 Nomenclature History
Previous Names
  • si:ch211-195h23.5 (1)
  • zIGBP1 (1)
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
No data available
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Sieger et al., 2009
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With gbp3 Human Ortholog
No data available
Associated With gbp3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001315 CARD domain
Domain IPR003191 Guanylate-binding protein/Atlastin, C-terminal
Domain IPR015894 Guanylate-binding protein, N-terminal
Domain IPR025307 FIIND domain
Domain IPR030386 GB1/RHD3-type guanine nucleotide-binding (G) domain
Domain IPR033516 CARD8/ASC/NALP1, CARD domain
Domain IPR037684 Guanylate-binding protein, C-terminal
Homologous_superfamily IPR011029 Death-like domain superfamily
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR036543 Guanylate-binding protein, C-terminal domain superfamily
Domain Details Per Protein
Protein Additional Resources Length CARD8/ASC/NALP1, CARD domain CARD domain Death-like domain superfamily FIIND domain GB1/RHD3-type guanine nucleotide-binding (G) domain Guanylate-binding protein/Atlastin, C-terminal Guanylate-binding protein, C-terminal Guanylate-binding protein, C-terminal domain superfamily Guanylate-binding protein, N-terminal P-loop containing nucleoside triphosphate hydrolase
UniProtKB:A0AB13A8G1 InterPro 881
UniProtKB:A0AC58GZW9 InterPro 965
UniProtKB:A0AC58GZX2 InterPro 965
UniProtKB:A0AC58GZX7 InterPro 965
UniProtKB:A0AC58GZY1 InterPro 965
UniProtKB:A0AC58GZY4 InterPro 965
UniProtKB:A0AC58GZY8 InterPro 965
UniProtKB:A0AC58GZZ1 InterPro 965
UniProtKB:A0AC58GZZ3 InterPro 965
UniProtKB:A0AC58GZZ7 InterPro 965
UniProtKB:A0AC58GZZ9 InterPro 965
UniProtKB:A0AC58H003 InterPro 965
UniProtKB:A0AC58H004 InterPro 965
UniProtKB:A0AC58H014 InterPro 965
UniProtKB:A0AC58H019 InterPro 965
UniProtKB:A0AC58H021 InterPro 1031
UniProtKB:B0V1H4 InterPro PDB 965
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA gbp3-201 (1) Ensembl 2,898 nt
mRNA gbp3-202 (1) Ensembl 3,271 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations