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ZIRC
ZFIN ID: ZDB-GENE-070410-62
Gene Name: zgc:162297
Gene Symbol: zgc:162297    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Predicted to have catalytic activity.
Genome Resources: Alliance (1),  Gene:555865 (1),  Ensembl(GRCz11):ENSDARG00000100912 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la026102Tg Transgenic Insertion Unknown Unknown DNA
y318Et Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zgc:162297 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zgc:162297 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function catalytic activity (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005137 (1)
  • InterPro:IPR011060 (1)
  • Pfam:PF03437 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:162297-201 (1)    Ensembl 1241
    ncRNA zgc:162297-002 (1)    Ensembl 724
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:162297 No data available
    MARKER RELATIONSHIPS
    zgc:162297 Contained in: [BAC] CH211-260E23 (1) (order this)
    zgc:162297 Encodes: [cDNA] MGC:162297 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001082801 (1) 1249 bp
    Genomic GenBank:CR352229 (1) 65552 bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ISR8 (1) 268 aa
    Sequence Clusters UniGene:85283 (1)
    Sequence Information (all 10)
    ORTHOLOGY for zgc:162297 ( Chr: 7 )
    CITATIONS (19)