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ZIRC
ZFIN ID: ZDB-GENE-070410-116
Gene Name: STRA6-like
Gene Symbol: stra6l    Nomenclature History

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Attributions

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Previous Names: rbpr2 (1), zgc:162946

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Involved in several processes, including optokinetic behavior; photoreceptor cell maintenance; and photoreceptor cell outer segment organization. Localizes to the organelle membrane and plasma membrane. Is expressed in digestive system; endodermal cell; somite; and yolk syncytial layer.
Genome Resources: Alliance (1),  Gene:100000104 (1),  Ensembl(GRCz11):ENSDARG00000062467 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
muz97 Insertion Unknown Premature Stop TALEN
sa10706 Point Mutation Exon 5 Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa32616 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zko265a Indel Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • zko265b Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-stra6l 1
    TALEN1-stra6l 1
    DISEASE ASSOCIATED WITH stra6l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH stra6l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process retinol transport (more)
    Cellular Component organelle membrane (more)
    Molecular Function molecular_function (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA stra6l-205 (1)    Ensembl 2423
    stra6l-206 (1)    Ensembl 947
    ncRNA stra6l-002 (1)    Ensembl 605
    stra6l-003 (1)    Ensembl 569
    stra6l-004 (1)    Ensembl 444
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM stra6l No data available
    MARKER RELATIONSHIPS
    stra6l Contained in: [BAC] CH211-288H2 (1) (order this)
    stra6l Encodes: [cDNA] MGC:162946 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089448 (1) 2442 bp
    Genomic GenBank:CR388406 (1) 161800 bp
    Select Tool
    Polypeptide UniProtKB:A3KP50 (1) 609 aa
    Sequence Clusters UniGene:16479 (1)
    Sequence Information (all 13)
    ORTHOLOGY for stra6l ( Chr: 1 )
    CITATIONS (19)