ZFIN is now using GRCz12tu for Genomic Data
Gene
ctdsplb
- ID
- ZDB-GENE-060929-488
- Name
- CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b
- Symbol
- ctdsplb Nomenclature History
- Previous Names
-
- wu:fd18d04
- zgc:154102
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable RNA polymerase II CTD heptapeptide repeat phosphatase activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human CTDSPL (CTD small phosphatase like).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR004274 | FCP1 homology domain |
| Domain | IPR011948 | Dullard phosphatase domain, eukaryotic |
| Family | IPR040078 | CTD small RNA polymerase II polypeptide A phosphatase-like |
| Family | IPR050365 | Mitochondrial import inner membrane translocase subunit TIM50 |
| Homologous_superfamily | IPR023214 | HAD superfamily |
| Homologous_superfamily | IPR036412 | HAD-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | CTD small RNA polymerase II polypeptide A phosphatase-like | Dullard phosphatase domain, eukaryotic | FCP1 homology domain | HAD-like superfamily | HAD superfamily | Mitochondrial import inner membrane translocase subunit TIM50 |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q08BV3 | InterPro | 266 | ||||||
| UniProtKB:A0A8M2BAS3 | InterPro | 277 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ctdsplb-202
(1)
|
Ensembl | 918 nt | ||
| mRNA |
ctdsplb-203
(1)
|
Ensembl | 896 nt | ||
| mRNA |
ctdsplb-204
(1)
|
Ensembl | 1,218 nt | ||
| ncRNA |
ctdsplb-002
(1)
|
Ensembl | 469 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers