ZFIN is now using GRCz12tu for Genomic Data
Gene
rnf183
- ID
- ZDB-GENE-060929-1090
- Name
- ring finger protein 183
- Symbol
- rnf183 Nomenclature History
- Previous Names
-
- zgc:153310 (1)
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Orthologous to several human genes including RNF225 (ring finger protein 225).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR027370 | Zinc finger, RING-type, eukaryotic |
| Family | IPR051435 | RING finger E3 ubiquitin-protein ligases |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
Domain Details Per Protein
| Protein | Additional Resources | Length | RING finger E3 ubiquitin-protein ligases | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site | Zinc finger, RING-type, eukaryotic |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9QLI5 | InterPro | 316 | |||||
| UniProtKB:Q08CB0 | InterPro | 316 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
bx629344.1-201
(1)
|
Ensembl | 2,431 nt | ||
| mRNA |
rnf183-201
(1)
|
Ensembl | 1,843 nt | ||
| mRNA |
rnf183-202
(1)
|
Ensembl | 905 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers