Gene
rabggta
- ID
- ZDB-GENE-060929-1042
- Name
- Rab geranylgeranyltransferase subunit alpha
- Symbol
- rabggta Nomenclature History
- Previous Names
-
- zgc:153107
- Type
- protein_coding_gene
- Location
- Chr: 23 Mapping Details/Browsers
- Description
- Predicted to enable protein prenyltransferase activity and zinc ion binding activity. Predicted to contribute to Rab geranylgeranyltransferase activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to act upstream of or within protein prenylation. Predicted to be part of Rab-protein geranylgeranyltransferase complex. Predicted to be active in cytoplasm. Orthologous to human RABGGTA (Rab geranylgeranyltransferase subunit alpha).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Hsu et al., 2013
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR009087 | Rab geranylgeranyltransferase, alpha subunit, insert-domain |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Homologous_superfamily | IPR036254 | Rab geranylgeranyltransferase, alpha subunit, insert-domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR002088 | Protein prenyltransferase, alpha subunit |
1 - 5 of 5
Domain Details Per Protein
| Protein | Additional Resources | Length | Leucine-rich repeat | Leucine-rich repeat domain superfamily | Protein prenyltransferase, alpha subunit | Rab geranylgeranyltransferase, alpha subunit, insert-domain | Rab geranylgeranyltransferase, alpha subunit, insert-domain superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q08CG5 | InterPro | 580 | |||||
| UniProtKB:A0A8M1NBE9 | InterPro | 580 |
1 - 2 of 2
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rabggta-201
(1)
|
Ensembl | 2,995 nt | ||
| ncRNA |
rabggta-002
(1)
|
Ensembl | 881 nt |
1 - 2 of 2
Interactions and Pathways
No data available
Plasmids
No data available