Gene

srrd

ID

ZDB-GENE-060825-269

Name

SRR1 domain containing

Symbol

srrd Nomenclature History

Previous Names

zgc:153763 (1)

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Predicted to be involved in circadian rhythm and microtubule-based process. Predicted to localize to cytoplasm and nucleus. Orthologous to human SRRD (SRR1 domain containing).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With srrd Human Ortholog

No data available

Associated With srrd Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR012942	SRR1-like domain
Family	IPR040044	SRR1-like protein

Domain Details Per Protein

Protein	Length	SRR1-like domain	SRR1-like protein
UniProtKB:A0A8M6Z0J0 InterPro	247
UniProtKB:A0A8M6Z262 InterPro	241
UniProtKB:A0A8M2BJQ4 InterPro	280
UniProtKB:Q0P3W1 InterPro	274
UniProtKB:A0A8M3B4N3 InterPro	224

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
antisense	ottdart00000059744 (1) Ensembl	Ensembl	755 nt	Select Tool
mRNA	srrd-201 (1) Ensembl	Ensembl	706 nt	Select Tool
mRNA	srrd-202 (1) Ensembl	Ensembl	1,310 nt	Select Tool
mRNA	srrd-203 (1) Ensembl	Ensembl	897 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations