ZFIN is now using GRCz12tu for Genomic Data
Gene
npas4a
- ID
- ZDB-GENE-060616-396
- Name
- neuronal PAS domain protein 4a
- Symbol
- npas4a Nomenclature History
- Previous Names
-
- npas4
- wu:fj52d04
- zgc:136764
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within blood vessel development and forebrain development. Predicted to be located in nucleus. Is expressed in forebrain. Orthologous to human NPAS4 (neuronal PAS domain protein 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 12 figures from 10 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Klarić et al., 2014
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Myc-type, basic helix-loop-helix (bHLH) domain | NPAS4, bHLH domain | PAS domain | PAS domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:Q1ECW2 | InterPro | 933 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
npas4a-201
(1)
|
Ensembl | 4,736 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers