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ZIRC
ZFIN ID: ZDB-GENE-060531-56
Gene Name: excision repair cross-complementation group 6-like
Gene Symbol: ercc6l    Nomenclature History

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Previous Name: si:ch211-278b8.3 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have DNA translocase activity. Predicted to be involved in cell division and intein-mediated protein splicing. Predicted to localize to the condensed chromosome kinetochore. Orthologous to human ERCC6L (ERCC excision repair 6 like, spindle assembly checkpoint helicase).
Genome Resources: Alliance (1),  Gene:100005291 (1),  Ensembl(GRCz11):ENSDARG00000002479 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7163607]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa2215 Point Mutation Unknown Premature Stop ENU
sa20402 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa31433 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa40415 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-ercc6l N/A 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ercc6l HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ercc6l VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cell cycle (more)
    Cellular Component chromosome (more)
    Molecular Function ATP binding (more)
    GO Terms (all 14)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA ercc6l-201 (1)    Ensembl 4697
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM ercc6l No data available
    MARKER RELATIONSHIPS
    ercc6l Contained in: [BAC] CH211-135F11 (1) (order this), CH211-278B8 (1) (order this)
    ercc6l Encodes: [EST] IMAGE:7163607 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001100093 (1) 4356 bp
    Genomic GenBank:CR391924 (1) 142997 bp
    Select Tool
    Polypeptide UniProtKB:A2BGR3 (1) 1451 aa
    Sequence Clusters UniGene:38615 (1)
    Sequence Information (all 16)
    ORTHOLOGY for ercc6l ( Chr: 5 )
    CITATIONS (22)