Gene
slc25a25b
- ID
- ZDB-GENE-060526-340
- Name
- solute carrier family 25 member 25b
- Symbol
- slc25a25b Nomenclature History
- Previous Names
-
- si:dkey-7o20.1
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to enable ATP transmembrane transporter activity. Acts upstream of or within left/right pattern formation. Predicted to be located in mitochondrial inner membrane. Orthologous to human SLC25A25 (solute carrier family 25 member 25).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Hofherr et al., 2018
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Hofherr et al., 2018
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR002048 | EF-hand domain |
| Family | IPR002067 | Mitochondrial carrier protein |
| Family | IPR002167 | Solute carrier family 25 member 16-like |
| Homologous_superfamily | IPR011992 | EF-hand domain pair |
| Homologous_superfamily | IPR023395 | Mitochondrial carrier domain superfamily |
1 - 5 of 6 Show all
Domain Details Per Protein
| Protein | Additional Resources | Length | EF-hand domain | EF-hand domain pair | Mitochondrial carrier domain superfamily | Mitochondrial carrier protein | Mitochondrial substrate/solute carrier | Solute carrier family 25 member 16-like |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A2CEQ0 | InterPro | 469 | ||||||
| UniProtKB:A0A8M3B2K2 | InterPro | 536 | ||||||
| UniProtKB:F1QR29 | InterPro | 524 | ||||||
| UniProtKB:A0A8M3AZQ0 | InterPro | 481 | ||||||
| UniProtKB:A0AB32TVM5 | InterPro | 500 |
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- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc25a25b-201
(1)
|
Ensembl | 1,410 nt | ||
| mRNA |
slc25a25b-202
(1)
|
Ensembl | 1,596 nt |
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Interactions and Pathways
No data available
Plasmids
No data available
- Banu, S., Gaur, N., Nair, S., Ravikrishnan, T., Khan, S., Mani, S., Bharathi, S., Mandal, K., Kuram, N.A., Vuppaladadium, S., Ravi, R., Murthy, C.L.N., Quoseena, M., Babu, N.S., Idris, M.M. (2022) Transcriptomic and proteomic analysis of epimorphic regeneration in zebrafish caudal fin tissue. Genomics. 114(2):110300
- Hofherr, A., Seger, C., Fitzpatrick, F., Busch, T., Michel, E., Luan, J., Osterried, L., Linden, F., Kramer-Zucker, A., Wakimoto, B., Schütze, C., Wiedemann, N., Artati, A., Adamski, J., Walz, G., Kunji, E.R.S., Montell, C., Watnick, T., Köttgen, M. (2018) The mitochondrial transporter SLC25A25 links ciliary TRPP2 signaling and cellular metabolism. PLoS Biology. 16:e2005651
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Garcia-Reyero, N., Escalon, L., Prats, E., Faria, M., Soares, A.M., Raldúa, D. (2016) Targeted Gene Expression in Zebrafish Exposed to Chlorpyrifos-Oxon Confirms Phenotype-Specific Mechanisms Leading to Adverse Outcomes. Bulletin of environmental contamination and toxicology. 96(6):707-713
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