Gene
sv2ca
- ID
- ZDB-GENE-060526-233
- Name
- synaptic vesicle glycoprotein 2Ca
- Symbol
- sv2ca Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within chemical synaptic transmission; neurotransmitter transport; and transmembrane transport. Predicted to be located in cytoplasmic vesicle; membrane; and synapse. Predicted to be active in synaptic vesicle membrane. Orthologous to human SV2C (synaptic vesicle glycoprotein 2C).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
| Allele | Type | Localization | Consequence | Mutagen | Supplier |
|---|---|---|---|---|---|
| la025112Tg | Transgenic insertion | Unknown | Unknown | DNA | |
| sa18001 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa20517 | Allele with one point mutation | Unknown | Splice Site | ENU | |
| sa33695 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa40545 | Allele with one point mutation | Unknown | Premature Stop | ENU | |
| sa45226 | Allele with one point mutation | Unknown | Premature Stop | ENU |
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No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR005829 | Sugar transporter, conserved site |
| Domain | IPR020846 | Major facilitator superfamily domain |
| Family | IPR005828 | Major facilitator, sugar transporter-like |
| Family | IPR011701 | Major facilitator superfamily |
| Family | IPR022308 | Synaptic vesicle protein SV2 |
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Domain Details Per Protein
| Protein | Additional Resources | Length | Major facilitator, sugar transporter-like | Major facilitator superfamily | Major facilitator superfamily domain | MFS transporter superfamily | Sugar transporter, conserved site | Synaptic vesicle protein SV2 |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A2CF25 | InterPro | 745 | ||||||
| UniProtKB:A0A286Y8C7 | InterPro | 728 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | CH211-254O18 | ZFIN Curated Data | |
| Contained in | BAC | DKEY-18P14 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001128339 (1) | 2238 nt | ||
| Genomic | GenBank:BX294131 (1) | 164141 nt | ||
| Polypeptide | UniProtKB:A2CF25 (1) | 745 aa |
- Casey, M.A., Hill, J.T., Hoshijima, K., Bryan, C.D., Gribble, S.L., Brown, J.T., Chien, C.B., Yost, H.J., Kwan, K.M. (2021) Shutdown corner, a large deletion mutant isolated from a haploid mutagenesis screen in zebrafish. G3 (Bethesda). 12(3):
- Pedersen, J.E., Bergqvist, C.A., Larhammar, D. (2019) Evolution of vertebrate nicotinic acetylcholine receptors. BMC Evolutionary Biology. 19:38
- Qiu, W., Fang, M., Liu, J., Fu, C., Zheng, C., Chen, B., Wang, K.J. (2019) In vivo actions of Bisphenol F on the reproductive neuroendocrine system after long-term exposure in zebrafish. The Science of the total environment. 665:995-1002
- Lee, J., Horzmann, K.A., Freeman, J.L. (2018) An embryonic 100μg/L lead exposure results in sex-specific expression changes in genes associated with the neurological system in female or cancer in male adult zebrafish brains. Neurotoxicology and teratology. 65:60-69
- Bayés, À., Collins, M.O., Reig-Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J.S., Emes, R.D., Grant, S.G. (2017) Evolution of complexity in the zebrafish synapse proteome. Nature communications. 8:14613
- Perland, E., Bagchi, S., Klaesson, A., Fredriksson, R. (2017) Characteristics of 29 novel atypical solute carriers of major facilitator superfamily type: evolutionary conservation, predicted structure and neuronal co-expression. Open Biology. 7(9)
- Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. (2016) The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48(4):427-37
- Qiu, W., Zhao, Y., Yang, M., Farajzadeh, M., Pan, C., Wayne, N.L. (2016) Actions of Bisphenol A and Bisphenol S on the Reproductive Neuroendocrine System During Early Development in Zebrafish. Endocrinology. 157(2):636-47
- Hogl, S., van Bebber, F., Dislich, B., Kuhn, P.H., Haass, C., Schmid, B., and Lichtenthaler, S.F. (2013) Label-free quantitative analysis of the membrane proteome of Bace1 protease knock-out zebrafish brains. Proteomics. 13(9):1519-27
- Varshney, G.K., Lu, J., Gildea, D., Huang, H., Pei, W., Yang, Z., Huang, S.C., Schoenfeld, D.S., Pho, N., Casero, D., Hirase, T., Mosbrook-Davis, D.M., Zhang, S., Jao, L.E., Zhang, B., Woods, I.G., Zimmerman, S., Schier, A.F., Wolfsberg, T., Pellegrini, M., Burgess, S.M., and Lin, S. (2013) A large-scale zebrafish gene knockout resource for the genome-wide study of gene function. Genome research. 23(4):727-735
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