Gene
smyd1b
- ID
- ZDB-GENE-060522-1
- Name
- SET and MYND domain containing 1b
- Symbol
- smyd1b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 8 Mapping Details/Browsers
- Description
- Exhibits histone methyltransferase activity (H3-K4 specific) and myosin binding activity. Involved in heart contraction; histone H3-K4 methylation; and myofibril assembly. Localizes to M band. Is expressed in cardiovascular system; musculature system; segmental plate; somite; and tail bud. Orthologous to human SMYD1 (SET and MYND domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 21 figures from 13 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 33 figures from 12 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001214 | SET domain |
| Domain | IPR002893 | Zinc finger, MYND-type |
| Domain | IPR044418 | SMYD1, SET domain |
| Family | IPR050869 | Histone-lysine N-methyltransferase |
| Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Homologous_superfamily | IPR046341 | SET domain superfamily |
Domain Details Per Protein
| Protein | Length | Histone-lysine N-methyltransferase | SET domain | SET domain superfamily | SMYD1, SET domain | Tetratricopeptide-like helical domain superfamily | Zinc finger, MYND-type |
|---|---|---|---|---|---|---|---|
|
UniProtKB:Q2MJQ9
|
486 | ||||||
|
UniProtKB:Q2MJQ8
|
473 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
smyd1b-201
(1)
|
Ensembl | 1,422 nt | ||
| mRNA |
smyd1b-202
(1)
|
Ensembl | 1,819 nt |
Interactions and Pathways
No data available
Plasmids
No data available