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ZIRC
ZFIN ID: ZDB-GENE-060331-129
Gene Name: zgc:136864
Gene Symbol: zgc:136864    Nomenclature History

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Orthologous to human C19orf53 (chromosome 19 open reading frame 53).
Genome Resources: Alliance (1),  Gene:677749 (1),  Ensembl(GRCz11):ENSDARG00000059816 (2)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: Table 1 from Mueller et al., 2010
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
zko1111a Insertion Unknown Unknown CRISPR
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
CRISPR1-zgc:136864 1
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:136864 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:136864 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component cellular_component (more)
Molecular Function molecular_function (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019034 (1)
  • Pfam:PF09495 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA zgc:136864-201 (1)    Ensembl 1398
    ncRNA zgc:136864-002 (1)    Ensembl 503
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM zgc:136864 No data available
    MARKER RELATIONSHIPS
    zgc:136864 Contained in: [BAC] CH211-196H16 (1) (order this)
    [Fosmid] CH1073-343L23 (1) (order this)
    zgc:136864 Encodes: [EST] fk41f11 (1)
    [cDNA] MGC:136864 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001040044 (1) 1389 bp
    Genomic GenBank:AL929150 (1) 229480 bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q24JV4 (1) 98 aa
    Sequence Clusters UniGene:79332 (1)
    Sequence Information (all 15)
    ORTHOLOGY for zgc:136864 ( Chr: 1 )
    CITATIONS (15)