ZFIN is now using GRCz12tu for Genomic Data
Gene
afap1l1a
- ID
- ZDB-GENE-050913-76
- Name
- actin filament associated protein 1-like 1a
- Symbol
- afap1l1a Nomenclature History
- Previous Names
-
- afap1l1
- zgc:114084
- Type
- protein_coding_gene
- Location
- Chr: 14 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be located in several cellular components, including actin cytoskeleton; anchoring junction; and cell projection. Predicted to be active in cytosol. Is expressed in hindbrain. Orthologous to human AFAP1L1 (actin filament associated protein 1 like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Choe et al., 2011
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Actin-filament associated protein | PH-like domain superfamily | Pleckstrin homology domain |
|---|---|---|---|---|---|
| UniProtKB:B8JI73 | InterPro | 278 | |||
| UniProtKB:A0A8M3AS30 | InterPro | 759 | |||
| UniProtKB:A0A2R8RU06 | InterPro | 760 | |||
| UniProtKB:Q4V8Y7 | InterPro | 746 | |||
| UniProtKB:A0AB32T0C8 | InterPro | 746 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
afap1l1a-201
(1)
|
Ensembl | 2,970 nt | ||
| mRNA |
afap1l1a-202
(1)
|
Ensembl | 1,031 nt | ||
| mRNA |
afap1l1a-203
(1)
|
Ensembl | 2,540 nt | ||
| mRNA |
afap1l1a-204
(1)
|
Ensembl | 2,283 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers