ZFIN is now using GRCz12tu for Genomic Data
Gene
cabp2a
- ID
- ZDB-GENE-050913-25
- Name
- calcium binding protein 2a
- Symbol
- cabp2a Nomenclature History
- Previous Names
-
- zgc:112300 (1)
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable calcium channel regulator activity. Predicted to be active in cytoplasm. Is expressed in notochord and retinal inner nuclear layer. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 93. Orthologous to human CABP2 (calcium binding protein 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Di Donato et al., 2013
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| autosomal recessive nonsyndromic deafness 93 | Alliance | Deafness, autosomal recessive 93 | 614899 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Calcium binding protein 1/2/4/5 | EF-Hand 1, calcium-binding site | EF-hand domain | EF-hand domain pair |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3B2R3 | InterPro | 233 | ||||
| UniProtKB:A0A0R4IU57 | InterPro | 236 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cabp2a-201
(1)
|
Ensembl | 1,730 nt | ||
| ncRNA |
cabp2a-002
(1)
|
Ensembl | 488 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers