ZFIN is now using GRCz12tu for Genomic Data
Gene

zgc:162472

ID
ZDB-GENE-050809-88
Name
zgc:162472
Symbol
zgc:162472 Nomenclature History
Previous Names
  • im:7160152
  • wu:fc57d05
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable TFIIIC-class transcription factor complex binding activity. Predicted to be involved in RNA polymerase III preinitiation complex assembly. Predicted to be part of transcription factor TFIIIB complex. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 112. Orthologous to human BDP1 (BDP1 general transcription factor IIIB subunit).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With zgc:162472 Human Ortholog
No data available
Associated With zgc:162472 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001005 SANT/Myb domain
Domain IPR039467 Transcription factor TFIIIB component B'', Myb domain
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Additional Resources Length Homedomain-like superfamily SANT/Myb domain Transcription factor TFIIIB component B'', Myb domain
UniProtKB:A0A8M3AWP1 InterPro 1626
UniProtKB:A4IGA4 InterPro 536
UniProtKB:A0A8M3ATQ0 InterPro 1583
UniProtKB:A0A8M3ALZ8 InterPro 1626
UniProtKB:A0A8M6YV30 InterPro 1627
UniProtKB:A0AB32TAP1 InterPro 1590
UniProtKB:A0AC58I8X8 InterPro 1625
UniProtKB:A0AC58I8Y0 InterPro 1626
UniProtKB:A0AC58I8Y1 InterPro 1626
UniProtKB:A0AC58I8Y2 InterPro 1625
UniProtKB:A0AC58I8Y4 InterPro 1626
UniProtKB:A0AC58I8Y5 InterPro 1616
UniProtKB:A0AC58I8Y7 InterPro 1626
UniProtKB:A0AC58I8Y8 InterPro 1625
UniProtKB:A0AC58I8Y9 InterPro 1617
UniProtKB:A0AC58I8Z1 InterPro 1617
UniProtKB:A0AC58I8Z2 InterPro 1616
UniProtKB:A0AC58I8Z3 InterPro 1589
UniProtKB:A0AC58I8Z4 InterPro 1589
UniProtKB:A0AC58I8Z5 InterPro 1616
UniProtKB:A0AC58I8Z6 InterPro 1589
UniProtKB:A0AC58I8Z7 InterPro 1616
UniProtKB:A0AC58I8Z8 InterPro 1590
UniProtKB:A0AC58I8Z9 InterPro 1589
UniProtKB:A0AC58I900 InterPro 1615
UniProtKB:A0AC58I901 InterPro 1616
UniProtKB:A0AC58I902 InterPro 1582
UniProtKB:A0AC58I903 InterPro 1588
UniProtKB:A0AC58I904 InterPro 1617
UniProtKB:A0AC58I905 InterPro 1583
UniProtKB:A0AC58I906 InterPro 1571
UniProtKB:A0AC58I907 InterPro 1583
UniProtKB:A0AC58I908 InterPro 1588
UniProtKB:A0AC58I909 InterPro 1582
UniProtKB:A0AC58I910 InterPro 1581
UniProtKB:A0AC58I911 InterPro 1545
UniProtKB:A0AC58I912 InterPro 1546
UniProtKB:A0AC58I914 InterPro 1582
UniProtKB:A0AC58I915 InterPro 1588
UniProtKB:A0AC58I918 InterPro 1581
UniProtKB:A0AC58I919 InterPro 1582
UniProtKB:A0AC58I920 InterPro 1545
UniProtKB:A0AC58I922 InterPro 1582
UniProtKB:A0AC58I926 InterPro 1439
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA zgc:162472-201 (1) Ensembl 5,371 nt
mRNA zgc:162472-202 (1) Ensembl 1,774 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Citations