ZFIN is now using GRCz12tu for Genomic Data
Gene
acsl1a
- ID
- ZDB-GENE-050809-115
- Name
- acyl-CoA synthetase long chain family member 1a
- Symbol
- acsl1a Nomenclature History
- Previous Names
-
- acsl1
- zgc:110081
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable arachidonate-CoA ligase activity. Predicted to be involved in long-chain fatty acid metabolic process; long-chain fatty-acyl-CoA biosynthetic process; and very long-chain fatty acid metabolic process. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be active in endoplasmic reticulum and membrane. Is expressed in several structures, including digestive system; eye; gill; heart; and pleuroperitoneal region. Orthologous to human ACSL1 (acyl-CoA synthetase long chain family member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu853 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | AMP-binding, conserved site | AMP-dependent synthetase/ligase domain | ANL, N-terminal domain | Long-chain fatty acid CoA synthetase, eukaryotic |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BFN1 | InterPro | 697 | ||||
| UniProtKB:Q499A9 | InterPro | 697 | ||||
| UniProtKB:B8JK22 | InterPro | 697 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
acsl1a-201
(1)
|
Ensembl | 4,370 nt | ||
| mRNA |
acsl1a-202
(1)
|
Ensembl | 2,925 nt | ||
| mRNA |
acsl1a-204
(1)
|
Ensembl | 708 nt | ||
| ncRNA |
acsl1a-002
(1)
|
Ensembl | 559 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers