ZFIN is now using GRCz12tu for Genomic Data
Gene
setd4
- ID
- ZDB-GENE-050808-2
- Name
- SET domain containing 4
- Symbol
- setd4 Nomenclature History
- Previous Names
-
- zgc:112252 (1)
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable histone H3K4 methyltransferase activity and histone H4K20 methyltransferase activity. Predicted to be involved in chromatin remodeling and positive regulation of inflammatory response. Predicted to be active in cytosol and nucleus. Is expressed in telencephalon. Orthologous to human SETD4 (SET domain containing 4).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001214 | SET domain |
| Domain | IPR015353 | Rubisco LSMT, substrate-binding domain |
| Domain | IPR044429 | SETD4, SET domain |
| Family | IPR016852 | SET domain methyltransferase |
| Family | IPR050600 | SETD3/SETD6 methyltransferase |
| Homologous_superfamily | IPR036464 | Rubisco LSMT, substrate-binding domain superfamily |
| Homologous_superfamily | IPR046341 | SET domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Rubisco LSMT, substrate-binding domain | Rubisco LSMT, substrate-binding domain superfamily | SETD3/SETD6 methyltransferase | SETD4, SET domain | SET domain | SET domain methyltransferase | SET domain superfamily |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q4V9I9 | InterPro | 440 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers