ZFIN is now using GRCz12tu for Genomic Data
Gene
nrl
- ID
- ZDB-GENE-050729-1
- Name
- neural retina leucine zipper
- Symbol
- nrl Nomenclature History
- Previous Names
-
- zgc:136315
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within photoreceptor cell fate specification; retinal cone cell development; and retinal rod cell development. Predicted to be active in nucleus. Is expressed in eye; lens; retina; retinal outer nuclear layer; and solid lens vesicle. Human ortholog(s) of this gene implicated in enhanced S-cone syndrome; retinitis pigmentosa; and retinitis pigmentosa 27. Orthologous to human NRL (neural retina leucine zipper).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 6 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 14 figures from 3 publications
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| retinitis pigmentosa 27 | Alliance | Retinitis pigmentosa 27 | 613750 |
| Enhanced S-cone syndrome 2 | 621371 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR004826 | Basic leucine zipper domain, Maf-type |
| Domain | IPR004827 | Basic-leucine zipper domain |
| Family | IPR024874 | Transcription factor Maf family |
| Homologous_superfamily | IPR008917 | Transcription factor, Skn-1-like, DNA-binding domain superfamily |
| Homologous_superfamily | IPR046347 | Basic-leucine zipper domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Basic-leucine zipper domain | Basic leucine zipper domain, Maf-type | Basic-leucine zipper domain superfamily | Transcription factor Maf family | Transcription factor, Skn-1-like, DNA-binding domain superfamily |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q1RM92 | InterPro | 412 | |||||
| UniProtKB:A0AB32TC82 | InterPro | 412 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers