ZFIN is now using GRCz12tu for Genomic Data
Gene
c1qtnf5
- ID
- ZDB-GENE-050706-101
- Name
- C1q and TNF related 5
- Symbol
- c1qtnf5 Nomenclature History
- Previous Names
-
- wu:fb02c10
- wu:fb02f05
- zgc:112378
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable receptor ligand activity. Predicted to be involved in signal transduction. Predicted to be active in extracellular region. Is expressed in eye. Human ortholog(s) of this gene implicated in late-onset retinal degeneration. Orthologous to human C1QTNF5 (C1q and TNF related 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| late-onset retinal degeneration | Alliance | Retinal degeneration, late-onset, autosomal dominant | 605670 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | C1q domain | Collagen/C1q domain-containing | Collagen triple helix repeat | Tumour necrosis factor-like domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:Q4KMC6 | InterPro | 248 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
c1qtnf5-201
(1)
|
Ensembl | 1,084 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers