trnau1apa

ID

ZDB-GENE-050522-502

Name

tRNA selenocysteine 1 associated protein 1a

Symbol

trnau1apa Nomenclature History

Previous Names

trnau1ap
zgc:110606 (1)

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable mRNA binding activity. Predicted to be involved in mRNA splice site recognition. Predicted to act upstream of or within translation. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol. Orthologous to human TRNAU1AP (tRNA selenocysteine 1 associated protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:110606 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trnau1apa Human Ortholog

No data available

Associated With trnau1apa Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR041085	tRNA selenocysteine 1-associated protein 1, C-terminal
Family	IPR040434	tRNA selenocysteine 1-associated protein 1
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily