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ZIRC
ZFIN ID: ZDB-GENE-050522-492
Gene Name: polypyrimidine tract binding protein 1a
Gene Symbol: ptbp1a
Sequence Ontology ID : SO:0000704

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Previous Names: brb, ptbp1, brom bones (1), hnRNP I (1), wu:fb99f12, zgc:110689

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity. Involved in several processes, including intestinal epithelial structure maintenance; negative regulation of Notch signaling pathway; and positive regulation  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
p50ada Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa17243 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • DISEASE ASSOCIATED WITH ptbp1a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ptbp1a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process dorsal/ventral pattern formation (more)
    Cellular Component nucleus (more)
    Molecular Function nucleic acid binding (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA ptbp1a-002 (1) 541
    mRNA ptbp1a-201 (1) 3855
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ptbp1a No data available
    MARKER RELATIONSHIPS
    ptbp1aContained in: [BAC] DKEY-57I11 (1) (order this)
    ptbp1aEncodes: [EST] fb99f12 (1)
    [cDNA] MGC:110689 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020477 (1) 3723bp
    Genomic GenBank:CR788230 (1) 222975bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q503D3 (1) 574aa
    Sequence Clusters UniGene:45492 (1)
    Sequence Information (all 16)
    ORTHOLOGY for ptbp1a (Chr: 2)
    CITATIONS (28)