Gene

trim44

ID

ZDB-GENE-050522-37

Name

tripartite motif containing 44

Symbol

trim44 Nomenclature History

Previous Names

wu:fc89g05
zgc:113192

Type

protein_coding_gene

Location

Chr: 25 Mapping Details/Browsers

Description

Predicted to have zinc ion binding activity. Human ortholog(s) of this gene implicated in aniridia. Orthologous to human TRIM44 (tripartite motif containing 44).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:113192 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With trim44 Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		?Aniridia 3	617142

Associated With trim44 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000315	B-box-type zinc finger
Family	IPR051051	E3 ubiquitin-protein ligase TRIM/RNF

Domain Details Per Protein

Protein	Length	B-box-type zinc finger	E3 ubiquitin-protein ligase TRIM/RNF
UniProtKB:F1R9P7 InterPro	294
UniProtKB:A0A8M3AZX1 InterPro	309
UniProtKB:A0A8M6YVZ0 InterPro	324
UniProtKB:A0A8M2BAE0 InterPro	309

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	trim44-201 (1) Ensembl	Ensembl		2,868 nt	Select Tool ZFIN BLAST
ncRNA	trim44-002 (1) Ensembl	Ensembl		423 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations