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ZIRC
ZFIN ID: ZDB-GENE-050522-279
Gene Name: calpain 8
Gene Symbol: capn8    Nomenclature History

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Previous Names: hm:zehn1036, si:ch73-80n6.2, zgc:112467

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 22 Mapping Details/Browsers
Description: Predicted to have calcium-dependent cysteine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to localize to the cytoplasm. Orthologous to human CAPN8 (calpain 8).
Genome Resources: Alliance (1), Gene:337730 (1), Ensembl(GRCz11):ENSDARG00000055715 (1)
GENE EXPRESSION
All Expression Data: Fig. 3 from Gomez et al., 2012
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014212Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa5973 Point Mutation Unknown Splice Site ENU
    sa29806 Point Mutation Unknown Missense, Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH capn8 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH capn8 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process digestion (more)
    Cellular Component cytoplasm (more)
    Molecular Function calcium-dependent cysteine-type endopeptidase activity (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA capn8-201 (1)    Ensembl 2322
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM capn8No data available
    MARKER RELATIONSHIPS
    capn8Contained in: [BAC] CH73-80N6 (1) (order this), CH211-203K12 (1) (order this)
    capn8Encodes: [EST] zehn1036 (1)
    [cDNA] MGC:112467 (1) (order this), MGC:192736 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001244080 (1) 2352bp
    Genomic GenBank:BX004801 113290bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RNP1 (1) 724aa
    Sequence Clusters UniGene:76656 (1)
    Sequence Information (all 15)
    ORTHOLOGY for capn8 (Chr: 22)
    CITATIONS (30)