Gene

farsa

ID
ZDB-GENE-050512-2
Name
phenylalanyl-tRNA synthetase subunit alpha
Symbol
farsa Nomenclature History
Previous Names
  • farsla (1)
  • wu:fj21a11
  • zgc:136506
  • zgc:158185
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have phenylalanine-tRNA ligase activity. Predicted to be involved in phenylalanyl-tRNA aminoacylation and protein heterotetramerization. Predicted to localize to cytosol and phenylalanine-tRNA ligase complex. Orthologous to human FARSA (phenylalanyl-tRNA synthetase subunit alpha).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from Giong et al., 2021
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With farsa Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Rajab interstitial lung disease with brain calcifications 2 619013
Associated With farsa Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002319 Phenylalanyl-tRNA synthetase
Domain IPR006195 Aminoacyl-tRNA synthetase, class II
Domain IPR040586 PheRS DNA binding domain 2
Domain IPR040724 PheRS, DNA binding domain 1
Domain IPR040725 PheRS, DNA binding domain 3
Family IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit
Homologous_superfamily IPR036390 Winged helix DNA-binding domain superfamily
Homologous_superfamily IPR045864 Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)
Domain Details Per Protein
Protein Length Aminoacyl-tRNA synthetase, class II Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) Phenylalanyl-tRNA synthetase Phenylalanyl-tRNA synthetase, class IIc, alpha subunit PheRS, DNA binding domain 1 PheRS DNA binding domain 2 PheRS, DNA binding domain 3 Winged helix DNA-binding domain superfamily
UniProtKB:Q1JPX3 497
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA farsa-201 (1) Ensembl 1,884 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations