Gene
hmgb3a
- ID
- ZDB-GENE-050428-1
- Name
- high mobility group box 3a
- Symbol
- hmgb3a Nomenclature History
- Previous Names
-
- wu:fb17a03
- wu:fk52f12
- zgc:162415
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Description
- Predicted to enable DNA binding activity. Predicted to be located in nucleus. Is expressed in several structures, including axis; intermediate cell mass of mesoderm; mesoderm; nervous system; and pectoral fin bud. Human ortholog(s) of this gene implicated in syndromic microphthalmia 13. Orthologous to human HMGB3 (high mobility group box 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 9 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7156270 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| syndromic microphthalmia 13 | Alliance | ?Microphthalmia, syndromic 13 | 300915 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | High mobility group box domain | High mobility group box domain superfamily | High Mobility Group Box (HMGB) |
|---|---|---|---|---|
|
UniProtKB:F1QGP8
|
213 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
hmgb3a-201
(1)
|
Ensembl | 589 nt | ||
| mRNA |
hmgb3a-202
(1)
|
Ensembl | 1,709 nt | ||
| mRNA |
hmgb3a-204
(1)
|
Ensembl | 837 nt | ||
| ncRNA |
hmgb3a-002
(1)
|
Ensembl | 675 nt |
Interactions and Pathways
No data available
Plasmids
No data available