Gene

psmd5

ID

ZDB-GENE-050417-28

Name

proteasome 26S subunit, non-ATPase 5

Symbol

psmd5 Nomenclature History

Previous Names

im:7137623
zgc:110116 (1)

Type

protein_coding_gene

Location

Chr: 21 Mapping Details/Browsers

Description

Predicted to be involved in proteasome assembly. Orthologous to human PSMD5 (proteasome 26S subunit, non-ATPase 5).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

IMAGE:7137623 (1 image)
IMAGE:7159869 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With psmd5 Human Ortholog

No data available

Associated With psmd5 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR019538	26S proteasome non-ATPase regulatory subunit 5
Homologous_superfamily	IPR011989	Armadillo-like helical
Homologous_superfamily	IPR016024	Armadillo-type fold

Domain Details Per Protein

Protein	Length	26S proteasome non-ATPase regulatory subunit 5	Armadillo-like helical	Armadillo-type fold
UniProtKB:Q6DHD2 InterPro	494
UniProtKB:Q561Y6 InterPro	291
UniProtKB:F1QU35 InterPro	505

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	psmd5-202 (1) Ensembl	Ensembl		1,774 nt	Select Tool
ncRNA	psmd5-002 (1) Ensembl	Ensembl		654 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations