Gene

accs

ID

ZDB-GENE-050327-39

Name

1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)

Symbol

accs Nomenclature History

Previous Names

fa10f06
wu:fa10f06
zgc:113217 (1)

Type

protein_coding_gene

Location

Chr: 25 Mapping Details/Browsers

Description

Predicted to enable transaminase activity. Predicted to be involved in amino acid metabolic process. Predicted to act upstream of or within biosynthetic process. Orthologous to human ACCS (1-aminocyclopropane-1-carboxylate synthase homolog (inactive)).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:113217 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With accs Human Ortholog

No data available

Associated With accs Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Binding_site	IPR004838	Aminotransferases, class-I, pyridoxal-phosphate-binding site
Domain	IPR004839	Aminotransferase, class I/classII, large domain
Domain	IPR044822	Myb/SANT-like DNA-binding domain 4
Family	IPR050478	Ethylene and sulfur compound biosynthesis-related protein
Homologous_superfamily	IPR015421	Pyridoxal phosphate-dependent transferase, major domain
Homologous_superfamily	IPR015422	Pyridoxal phosphate-dependent transferase, small domain
Homologous_superfamily	IPR015424	Pyridoxal phosphate-dependent transferase

Domain Details Per Protein

Protein	Additional Resources	Length	Aminotransferase, class I/classII, large domain	Aminotransferases, class-I, pyridoxal-phosphate-binding site	Ethylene and sulfur compound biosynthesis-related protein	Myb/SANT-like DNA-binding domain 4	Pyridoxal phosphate-dependent transferase	Pyridoxal phosphate-dependent transferase, major domain	Pyridoxal phosphate-dependent transferase, small domain
UniProtKB:Q58ES0	InterPro	556
UniProtKB:F1QMK2	InterPro	916

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	accs-201 (1) Ensembl	Ensembl	2,402 nt	Select Tool ZFIN BLAST
mRNA	accs-202 (1) Ensembl	Ensembl	3,677 nt	Select Tool ZFIN BLAST
ncRNA	accs-002 (1) Ensembl	Ensembl	791 nt	Select Tool ZFIN BLAST
ncRNA	accs-003 (1) Ensembl	Ensembl	881 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations