ZFIN is now using GRCz12tu for Genomic Data
Gene
slc47a1
- ID
- ZDB-GENE-050327-20
- Name
- solute carrier family 47 member 1
- Symbol
- slc47a1 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Is expressed in brain; eye; liver; pleuroperitoneal region; and yolk syncytial layer. Orthologous to human SLC47A1 (solute carrier family 47 member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7154749 (11 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Multi antimicrobial extrusion protein | Multidrug and toxic compound extrusion family, eukaryotic |
|---|---|---|---|---|
| UniProtKB:A0A8F5XXW9 | InterPro | |||
| UniProtKB:A1L2E7 | InterPro | 629 | ||
| UniProtKB:A0A8M9PCM0 | InterPro | 656 | ||
| UniProtKB:A0A8M1N4Q5 | InterPro | 629 | ||
| UniProtKB:A0AB32TBQ0 | InterPro | 634 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
slc47a1-201
(1)
|
Ensembl | 2,456 nt | ||
| mRNA |
slc47a1-202
(1)
|
Ensembl | 899 nt | ||
| mRNA |
slc47a1-203
(1)
|
Ensembl | 903 nt | ||
| mRNA |
slc47a1-204
(1)
|
Ensembl | 1,650 nt | ||
| mRNA |
slc47a1-205
(1)
|
Ensembl | 5,007 nt | ||
| mRNA |
slc47a1-206
(1)
|
Ensembl | 5,094 nt | ||
| mRNA |
slc47a1-207
(1)
|
Ensembl | 1,892 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers